Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Pelagicola sp. LXJ1103 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
607766 bp
Thymine Count
603262 bp
Guanine Count
942397 bp
Cytosine Count
950305 bp
Genome Length
3103730 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gnat family n-acetyltransferase | DD563_03920 | Not Available | Negative | 827747 - 828274 | 18720.3 |
| 50s ribosomal protein l27 | DD563_03925 | Not Available | Negative | 828389 - 828658 | 9461.59 |
| 50s ribosomal protein l21 | DD563_03930 | Not Available | Negative | 828670 - 829335 | 23124.1 |
| hypothetical protein | DD563_03935 | Not Available | Negative | 829547 - 830380 | 30022.0 |
| hypothetical protein | DD563_03940 | Not Available | Negative | 830377 - 831174 | 28237.8 |
| Trna-ser | Not Available | Not Available | Positive | 831361 - 831450 | Not Available |
| hypothetical protein | DD563_03955 | Not Available | Positive | 832563 - 833177 | 23143.8 |
| hypothetical protein | DD563_03960 | Not Available | Negative | 833164 - 833373 | 7706.34 |
| hypothetical protein | DD563_03970 | Not Available | Positive | 834714 - 834932 | 7814.73 |
| hypothetical protein | DD563_03975 | Not Available | Negative | 834935 - 835345 | 14811.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
