Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Pelagicola sp. LXJ1103 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
607766 bp
Thymine Count
603262 bp
Guanine Count
942397 bp
Cytosine Count
950305 bp
Genome Length
3103730 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aminoacyl-trna deacylase | DD563_03665 | Not Available | Positive | 772818 - 773285 | 15975.3 |
| hypothetical protein | DD563_03670 | Not Available | Positive | 773644 - 774099 | 16597.6 |
| arginyltransferase | DD563_03675 | Not Available | Positive | 774189 - 775019 | 30881.7 |
| hypothetical protein | DD563_03680 | Not Available | Positive | 775089 - 775436 | 12134.0 |
| acetolactate synthase 3 large subunit | DD563_03685 | Not Available | Positive | 775850 - 777604 | 63523.7 |
| acetolactate synthase small subunit | DD563_03690 | Not Available | Positive | 777643 - 778203 | 20310.5 |
| hypothetical protein | DD563_03695 | Not Available | Negative | 778257 - 778601 | 12538.8 |
| transcriptional regulator | DD563_03700 | Not Available | Positive | 778848 - 779660 | 30539.8 |
| (2fe-2s)-binding protein | DD563_03705 | Not Available | Positive | 779809 - 780972 | 43253.0 |
| hypothetical protein | DD563_03710 | Not Available | Positive | 780969 - 781181 | 7544.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
