Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Pelagicola sp. LXJ1103 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
607766 bp
Thymine Count
603262 bp
Guanine Count
942397 bp
Cytosine Count
950305 bp
Genome Length
3103730 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| luxr family transcriptional regulator | DD563_02760 | Not Available | Negative | 572955 - 573758 | 30441.1 |
| hypothetical protein | DD563_02765 | Not Available | Positive | 573910 - 575061 | 43684.0 |
| tyrosine recombinase | DD563_02770 | Not Available | Positive | 575253 - 576176 | 34869.4 |
| hypothetical protein | DD563_02775 | Not Available | Positive | 577107 - 578048 | 34412.4 |
| hypothetical protein | DD563_02780 | Not Available | Positive | 578225 - 579418 | 44408.6 |
| hypothetical protein | DD563_02785 | Not Available | Negative | 580038 - 580631 | 21897.2 |
| hypothetical protein | DD563_02790 | Not Available | Positive | 581031 - 581951 | 34134.3 |
| hypothetical protein | DD563_02795 | Not Available | Negative | 582043 - 583506 | 55413.5 |
| tir domain protein | DD563_02800 | Not Available | Negative | 583579 - 584283 | 24434.8 |
| hypothetical protein | DD563_02805 | Not Available | Negative | 584331 - 584600 | 9011.66 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
