Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Pelagicola sp. LXJ1103 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
607766 bp
Thymine Count
603262 bp
Guanine Count
942397 bp
Cytosine Count
950305 bp
Genome Length
3103730 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DD563_02410 | Not Available | Positive | 498295 - 499008 | 25159.9 |
| hypothetical protein | DD563_02415 | Not Available | Positive | 499005 - 499568 | 20333.0 |
| hypothetical protein | DD563_02420 | Not Available | Positive | 499565 - 500578 | 36634.9 |
| hypothetical protein | DD563_02425 | Not Available | Positive | 500578 - 501114 | 19275.3 |
| hypothetical protein | DD563_02430 | Not Available | Positive | 501063 - 501806 | 25761.4 |
| molecular chaperone tord | DD563_02435 | Not Available | Positive | 501927 - 502589 | 23260.6 |
| hypothetical protein | DD563_02440 | Not Available | Positive | 502644 - 502853 | 7424.66 |
| formate dehydrogenase | DD563_02445 | Not Available | Positive | 502857 - 505817 | 108341.0 |
| formate dehydrogenase | DD563_02450 | Not Available | Positive | 505832 - 506428 | 21492.7 |
| formate dehydrogenase subunit gamma | DD563_02455 | Not Available | Positive | 506444 - 507469 | 36327.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
