Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Pelagicola sp. LXJ1103 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
607766 bp
Thymine Count
603262 bp
Guanine Count
942397 bp
Cytosine Count
950305 bp
Genome Length
3103730 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphonate abc transporter atp-binding protein | DD563_15205 | Not Available | Negative | 3096700 - 3097515 | 29876.1 |
| hypothetical protein | DD563_15210 | Not Available | Positive | 3097736 - 3098029 | 10700.8 |
| phosphodiesterase | DD563_15220 | Not Available | Negative | 3098333 - 3099160 | 30709.4 |
| abc transporter substrate-binding protein | DD563_15225 | Not Available | Negative | 3099237 - 3100484 | 45530.7 |
| sugar abc transporter permease | DD563_15230 | Not Available | Negative | 3100585 - 3101547 | 35685.5 |
| abc transporter permease | DD563_15235 | Not Available | Negative | 3101544 - 3102512 | 35701.2 |
| glycerol-3-phosphate abc transporter atp-binding protein | DD563_15240 | Not Available | Negative | 3102514 - 3103668 | 41945.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
