Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Pelagicola sp. LXJ1103 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
607766 bp
Thymine Count
603262 bp
Guanine Count
942397 bp
Cytosine Count
950305 bp
Genome Length
3103730 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DD563_01345 | Not Available | Positive | 272639 - 273061 | 14357.6 |
| hypothetical protein | DD563_01350 | Not Available | Positive | 273064 - 273402 | 12095.1 |
| hypothetical protein | DD563_01355 | Not Available | Positive | 273531 - 273935 | 14300.2 |
| nadh-quinone oxidoreductase subunit g | DD563_01360 | Not Available | Positive | 273943 - 275955 | 71940.9 |
| hypothetical protein | DD563_01365 | Not Available | Positive | 275952 - 276335 | 13486.0 |
| nadh-quinone oxidoreductase subunit nuoh | DD563_01370 | Not Available | Positive | 276343 - 277380 | 38172.8 |
| hypothetical protein | DD563_01375 | Not Available | Positive | 277386 - 278156 | 29332.8 |
| nadh-quinone oxidoreductase subunit nuoi | DD563_01380 | Not Available | Positive | 278160 - 278654 | 18830.3 |
| hypothetical protein | DD563_01385 | Not Available | Positive | 278651 - 279073 | 15180.5 |
| nadh-quinone oxidoreductase subunit j | DD563_01390 | Not Available | Positive | 279070 - 279681 | 22172.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
