Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Pelagicola sp. LXJ1103 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
607766 bp
Thymine Count
603262 bp
Guanine Count
942397 bp
Cytosine Count
950305 bp
Genome Length
3103730 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l14 | DD563_14235 | Not Available | Positive | 2909924 - 2910292 | 13383.6 |
| 50s ribosomal protein l24 | DD563_14240 | Not Available | Positive | 2910294 - 2910605 | 10777.3 |
| 50s ribosomal protein l5 | DD563_14245 | Not Available | Positive | 2910598 - 2911161 | 20844.4 |
| 30s ribosomal protein s14 | DD563_14250 | Not Available | Positive | 2911181 - 2911486 | 11590.3 |
| 30s ribosomal protein s8 | DD563_14255 | Not Available | Positive | 2911499 - 2911891 | 14097.2 |
| 50s ribosomal protein l6 | DD563_14260 | Not Available | Positive | 2911902 - 2912435 | 19458.5 |
| 50s ribosomal protein l18 | DD563_14265 | Not Available | Positive | 2912448 - 2912807 | 12970.8 |
| 30s ribosomal protein s5 | DD563_14270 | Not Available | Positive | 2912927 - 2913514 | 21014.4 |
| 50s ribosomal protein l30 | DD563_14275 | Not Available | Positive | 2913518 - 2913706 | 6895.61 |
| 50s ribosomal protein l15 | DD563_14280 | Not Available | Positive | 2913979 - 2914458 | 16654.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
