Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Pelagicola sp. LXJ1103 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
607766 bp
Thymine Count
603262 bp
Guanine Count
942397 bp
Cytosine Count
950305 bp
Genome Length
3103730 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DD563_13125 | Not Available | Positive | 2689075 - 2689461 | 14758.8 |
| hypothetical protein | DD563_13130 | Not Available | Negative | 2689730 - 2690509 | 28710.5 |
| hypothetical protein | DD563_13135 | Not Available | Negative | 2690704 - 2691186 | 17831.6 |
| hypothetical protein | DD563_13140 | Not Available | Negative | 2691281 - 2691799 | 19679.2 |
| hypothetical protein | DD563_13145 | Not Available | Negative | 2692075 - 2692473 | 14620.7 |
| duf262 domain-containing protein | DD563_13150 | Not Available | Negative | 2692470 - 2694419 | 74085.5 |
| hypothetical protein | DD563_13155 | Not Available | Positive | 2695299 - 2695565 | 9642.24 |
| hypothetical protein | DD563_13160 | Not Available | Negative | 2695621 - 2697186 | 59163.6 |
| hypothetical protein | DD563_13165 | Not Available | Negative | 2697206 - 2697433 | 8254.91 |
| transcriptional regulator | DD563_13170 | Not Available | Negative | 2698189 - 2698590 | 14664.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
