Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Pelagicola sp. LXJ1103 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
607766 bp
Thymine Count
603262 bp
Guanine Count
942397 bp
Cytosine Count
950305 bp
Genome Length
3103730 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| crotonyl-coa carboxylase/reductase | DD563_08880 | Not Available | Negative | 1807061 - 1808344 | 47173.2 |
| glycerol-3-phosphate acyltransferase | DD563_08885 | Not Available | Negative | 1808455 - 1809849 | 51682.1 |
| hypothetical protein | DD563_08890 | Not Available | Negative | 1809846 - 1810046 | 7576.17 |
| protein meaa | DD563_08895 | Not Available | Positive | 1810067 - 1812058 | 72602.7 |
| gnat family n-acetyltransferase | DD563_08900 | Not Available | Positive | 1812089 - 1812532 | 16871.8 |
| hypothetical protein | DD563_08905 | Not Available | Negative | 1812554 - 1813342 | 28045.3 |
| duf2244 domain-containing protein | DD563_08910 | Not Available | Positive | 1813277 - 1813780 | 18543.5 |
| glutamyl-trna amidotransferase | DD563_08915 | Not Available | Negative | 1813796 - 1814257 | 16746.1 |
| carbamoyl phosphate synthase small subunit | DD563_08920 | Not Available | Positive | 1814432 - 1815580 | 41254.7 |
| glycosyl transferase | DD563_08925 | Not Available | Positive | 1815690 - 1817627 | 71654.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
