Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Pelagicola sp. LXJ1103 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
607766 bp
Thymine Count
603262 bp
Guanine Count
942397 bp
Cytosine Count
950305 bp
Genome Length
3103730 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DD563_08575 | Not Available | Positive | 1749539 - 1752004 | 91064.8 |
| hypothetical protein | DD563_08580 | Not Available | Positive | 1752593 - 1753249 | 23461.4 |
| resolvase | DD563_08585 | Not Available | Positive | 1753246 - 1753848 | 22232.9 |
| hypothetical protein | DD563_08590 | Not Available | Positive | 1753845 - 1754387 | 19766.3 |
| hypothetical protein | DD563_08595 | Not Available | Positive | 1754380 - 1754649 | 9437.32 |
| hypothetical protein | DD563_08600 | Not Available | Positive | 1754746 - 1755456 | 25096.8 |
| hypothetical protein | DD563_08605 | Not Available | Positive | 1755458 - 1755718 | 8452.03 |
| hypothetical protein | DD563_08610 | Not Available | Positive | 1755721 - 1756080 | 13543.5 |
| hypothetical protein | DD563_08615 | Not Available | Positive | 1756295 - 1758502 | 81509.4 |
| hypothetical protein | DD563_08620 | Not Available | Negative | 1758456 - 1759331 | 31424.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
