Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Pelagicola sp. LXJ1103 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
607766 bp
Thymine Count
603262 bp
Guanine Count
942397 bp
Cytosine Count
950305 bp
Genome Length
3103730 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DD563_07625 | Not Available | Positive | 1571772 - 1573184 | 49581.4 |
| carbon monoxide dehydrogenase | DD563_07630 | Not Available | Negative | 1573187 - 1573720 | 18672.0 |
| hypothetical protein | DD563_07635 | Not Available | Positive | 1573844 - 1574824 | 35509.7 |
| atpase | DD563_07640 | Not Available | Positive | 1574903 - 1576021 | 40326.4 |
| hypothetical protein | DD563_07645 | Not Available | Positive | 1576018 - 1577271 | 44785.5 |
| hypothetical protein | DD563_07650 | Not Available | Negative | 1577263 - 1577931 | 24736.7 |
| hypothetical protein | DD563_07655 | Not Available | Positive | 1578044 - 1578490 | 15713.8 |
| hypothetical protein | DD563_07660 | Not Available | Negative | 1578512 - 1578841 | 12229.3 |
| 5-methyltetrahydrofolate--homocysteine methyltransferase | DD563_07665 | Not Available | Positive | 1578976 - 1580076 | 38868.8 |
| methionine synthase | DD563_07670 | Not Available | Positive | 1580073 - 1582787 | 100205.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
