Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Pelagicola sp. LXJ1103 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
607766 bp
Thymine Count
603262 bp
Guanine Count
942397 bp
Cytosine Count
950305 bp
Genome Length
3103730 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| molybdopterin-guanine dinucleotide biosynthesis protein b | DD563_07270 | Not Available | Positive | 1500826 - 1501332 | 18501.2 |
| molybdopterin molybdenumtransferase moea | DD563_07275 | Not Available | Positive | 1501329 - 1503443 | 74849.6 |
| hypothetical protein | DD563_07280 | Not Available | Negative | 1503440 - 1504405 | 35326.1 |
| duf4336 domain-containing protein | DD563_07285 | Not Available | Negative | 1504478 - 1505254 | 28361.5 |
| peptidylprolyl isomerase | DD563_07290 | Not Available | Negative | 1505258 - 1505833 | 19667.4 |
| peptidylprolyl isomerase | DD563_07295 | Not Available | Negative | 1505826 - 1506332 | 18359.6 |
| phosphoglycerate kinase | DD563_07300 | Not Available | Positive | 1506475 - 1507659 | 40746.3 |
| fructose bisphosphate aldolase | DD563_07305 | Not Available | Positive | 1507753 - 1508646 | 31605.0 |
| septum formation initiator | DD563_07310 | Not Available | Positive | 1508801 - 1509100 | 11060.3 |
| pyruvate dehydrogenase (acetyl-transferring) e1 component subunit alpha | DD563_07315 | Not Available | Positive | 1509284 - 1510294 | 37026.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
