Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. HMWF019 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. HMWF019
Accession NumberQAIL00000000.1
Gene Summary
Adenine Count
2047598 bp
Thymine Count
2061021 bp
Guanine Count
1407723 bp
Cytosine Count
1388793 bp
Genome Length
6906470 bp
Protein-coding Genes
5696 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DBR11_00005 | Not Available | + | 18 - 2072 | 78313.6 |
| 16s ribosomal rna | Not Available | Not Available | + | 225 - 1748 | Not Available |
| hypothetical protein | DBR11_00010 | Not Available | + | 2075 - 3880 | 69577.5 |
| 23s ribosomal rna | Not Available | Not Available | + | 2310 - 5188 | Not Available |
| methylglutaconyl-coa hydratase | DBR11_00015 | Not Available | + | 3909 - 4688 | 28576.5 |
| hypothetical protein | DBR11_00020 | Not Available | + | 4705 - 5382 | 24463.5 |
| 5s ribosomal rna | Not Available | Not Available | + | 5293 - 5404 | Not Available |
| sulfatase | DBR11_00025 | Not Available | + | 5387 - 7252 | 71215.4 |
| s9 family peptidase | DBR11_00030 | Not Available | + | 7255 - 9429 | 82188.2 |
| ragb/susd family nutrient uptake outer membrane protein | DBR11_00035 | Not Available | + | 9664 - 11136 | 54266.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.