Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. HMWF019 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2047598 bp
Thymine Count
2061021 bp
Guanine Count
1407723 bp
Cytosine Count
1388793 bp
Genome Length
6906470 bp
Protein-coding Genes
5696 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyl transferase | DBR11_04760 | Not Available | Positive | 1152540 - 1153520 | 37066.6 |
| histidine phosphatase family protein | DBR11_04765 | Not Available | Positive | 1153567 - 1154076 | 19169.8 |
| amp nucleosidase | DBR11_04770 | Not Available | Negative | 1154119 - 1154934 | 30079.7 |
| atp-dependent clp protease atp-binding subunit clpx | DBR11_04775 | Not Available | Negative | 1155096 - 1156337 | 45866.7 |
| atp-dependent clp endopeptidase proteolytic subunit clpp | DBR11_04780 | Not Available | Negative | 1156342 - 1157031 | 25612.8 |
| trigger factor | DBR11_04785 | Not Available | Negative | 1157193 - 1158539 | 51253.8 |
| Trna-leu | Not Available | Not Available | Positive | 1158611 - 1158692 | Not Available |
| hypothetical protein | DBR11_04795 | Not Available | Negative | 1158855 - 1159298 | 17095.2 |
| ribonuclease | DBR11_04800 | Not Available | Negative | 1159398 - 1160750 | 50622.1 |
| ragb/susd family nutrient uptake outer membrane protein | DBR11_04805 | Not Available | Negative | 1161466 - 1162875 | 53975.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

