Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. HMWF019 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2047598 bp
Thymine Count
2061021 bp
Guanine Count
1407723 bp
Cytosine Count
1388793 bp
Genome Length
6906470 bp
Protein-coding Genes
5696 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| susc/raga family tonb-linked outer membrane protein | DBR11_04710 | Not Available | Negative | 1139958 - 1143320 | 123499.0 |
| anti-sigma factor | DBR11_04715 | Not Available | Negative | 1143563 - 1144807 | 46083.9 |
| hypothetical protein | DBR11_04720 | Not Available | Negative | 1144885 - 1145529 | 24376.8 |
| hypothetical protein | DBR11_04725 | Not Available | Negative | 1145601 - 1146737 | 42458.6 |
| rna polymerase subunit sigma-70 | DBR11_04730 | Not Available | Negative | 1146739 - 1147317 | 22413.0 |
| histidine phosphotransferase | DBR11_04735 | Not Available | Negative | 1147545 - 1147667 | 4828.95 |
| 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase | DBR11_04740 | Not Available | Negative | 1147685 - 1148179 | 18386.6 |
| signal peptide peptidase sppa | DBR11_04745 | Not Available | Positive | 1148298 - 1150064 | 64899.9 |
| hypothetical protein | DBR11_04750 | Not Available | Negative | 1150072 - 1150737 | 24459.1 |
| dna polymerase/3'-5' exonuclease polx | DBR11_04755 | Not Available | Positive | 1150830 - 1152533 | 63945.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

