Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. HMWF019 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2047598 bp
Thymine Count
2061021 bp
Guanine Count
1407723 bp
Cytosine Count
1388793 bp
Genome Length
6906470 bp
Protein-coding Genes
5696 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna topoisomerase iii | DBR11_04660 | Not Available | Negative | 1124949 - 1126799 | 69169.2 |
| histone deacetylase | DBR11_04665 | Not Available | Negative | 1126905 - 1127807 | 33718.4 |
| hypothetical protein | DBR11_04670 | Not Available | Negative | 1127807 - 1128667 | 32756.4 |
| hypothetical protein | DBR11_04675 | Not Available | Negative | 1128768 - 1129064 | 11454.4 |
| hypothetical protein | DBR11_04680 | Not Available | Negative | 1129080 - 1129844 | 29460.1 |
| chemotaxis protein cher | DBR11_04685 | Not Available | Positive | 1130177 - 1133419 | 121910.0 |
| error-prone dna polymerase | DBR11_04690 | Not Available | Negative | 1133485 - 1136577 | 117035.0 |
| nucleotidyltransferase | DBR11_04695 | Not Available | Negative | 1136588 - 1138096 | 57377.2 |
| error-prone repair protein imua | DBR11_04700 | Not Available | Negative | 1138099 - 1138836 | 27319.3 |
| ragb/susd family nutrient uptake outer membrane protein | DBR11_04705 | Not Available | Negative | 1139211 - 1139932 | 27006.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

