Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. HMWF019 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2047598 bp
Thymine Count
2061021 bp
Guanine Count
1407723 bp
Cytosine Count
1388793 bp
Genome Length
6906470 bp
Protein-coding Genes
5696 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xylosidase | DBR11_00385 | Not Available | Negative | 95089 - 96780 | 64844.9 |
| beta-glucosidase | DBR11_00390 | Not Available | Negative | 96842 - 98224 | 51766.3 |
| ragb/susd family nutrient uptake outer membrane protein | DBR11_00395 | Not Available | Negative | 98286 - 99773 | 54277.8 |
| susc/raga family tonb-linked outer membrane protein | DBR11_00400 | Not Available | Negative | 99785 - 102856 | 110326.0 |
| transcriptional regulator | DBR11_00405 | Not Available | Negative | 103111 - 106002 | 110583.0 |
| hypothetical protein | DBR11_00410 | Not Available | Negative | 105999 - 106934 | 34810.3 |
| hypothetical protein | DBR11_00415 | Not Available | Positive | 107031 - 107258 | 8546.46 |
| hypothetical protein | DBR11_00420 | Not Available | Negative | 107558 - 110008 | 94812.8 |
| glycine c-acetyltransferase | DBR11_00425 | Not Available | Positive | 110115 - 111302 | 43341.2 |
| phenylalanine--trna ligase subunit alpha | DBR11_00430 | Not Available | Positive | 111424 - 112461 | 39224.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

