Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. HMWF019 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2047598 bp
Thymine Count
2061021 bp
Guanine Count
1407723 bp
Cytosine Count
1388793 bp
Genome Length
6906470 bp
Protein-coding Genes
5696 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aldehyde dehydrogenase | DBR11_04350 | Not Available | Positive | 1058402 - 1058863 | 17280.1 |
| hypothetical protein | DBR11_04355 | Not Available | Positive | 1059015 - 1059221 | 7176.76 |
| acetate/propionate family kinase | DBR11_04360 | Not Available | Positive | 1059193 - 1060395 | 43936.9 |
| phosphoketolase | DBR11_04365 | Not Available | Positive | 1060422 - 1062803 | 89708.9 |
| class i sam-dependent methyltransferase | DBR11_04370 | Not Available | Positive | 1062846 - 1063595 | 28998.2 |
| arac family transcriptional regulator | DBR11_04375 | Not Available | Positive | 1063693 - 1064760 | 39634.8 |
| type i glyceraldehyde-3-phosphate dehydrogenase | DBR11_04380 | Not Available | Positive | 1064771 - 1065748 | 35244.3 |
| abc transporter permease | DBR11_04385 | Not Available | Negative | 1065759 - 1066730 | 36158.4 |
| abc transporter atp-binding protein | DBR11_04390 | Not Available | Negative | 1066738 - 1067685 | 35053.5 |
| hypothetical protein | DBR11_04395 | Not Available | Negative | 1067690 - 1068547 | 30856.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

