Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. HMWF019 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2047598 bp
Thymine Count
2061021 bp
Guanine Count
1407723 bp
Cytosine Count
1388793 bp
Genome Length
6906470 bp
Protein-coding Genes
5696 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| polysaccharide deacetylase family protein | DBR11_03695 | Not Available | Positive | 905586 - 906203 | 24038.0 |
| aconitate hydratase | DBR11_03700 | Not Available | Positive | 906489 - 908765 | 82240.8 |
| beta-glucosidase | DBR11_03705 | Not Available | Negative | 908844 - 910181 | 50602.3 |
| dna mismatch repair protein muts | DBR11_03710 | Not Available | Negative | 910252 - 912069 | 69395.2 |
| 23s rrna (pseudouridine(1915)-n(3))-methyltransferase rlmh | DBR11_03715 | Not Available | Positive | 912132 - 912605 | 18046.0 |
| hypothetical protein | DBR11_03720 | Not Available | Negative | 912873 - 913409 | 19192.0 |
| peptidyl-prolyl cis-trans isomerase | DBR11_03725 | Not Available | Negative | 913436 - 913897 | 16800.8 |
| asparagine synthetase b | DBR11_03730 | Not Available | Positive | 914044 - 915300 | 47277.4 |
| hypothetical protein | DBR11_03735 | Not Available | Negative | 915297 - 917297 | 76827.9 |
| purine-nucleoside phosphorylase | DBR11_03740 | Not Available | Negative | 917297 - 918112 | 29884.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

