Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. HMWF019 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2047598 bp
Thymine Count
2061021 bp
Guanine Count
1407723 bp
Cytosine Count
1388793 bp
Genome Length
6906470 bp
Protein-coding Genes
5696 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| s-layer protein | DBR11_03645 | Not Available | Negative | 891112 - 892419 | 49740.4 |
| duf5017 domain-containing protein | DBR11_03650 | Not Available | Negative | 892421 - 893338 | 33372.6 |
| ragb/susd family nutrient uptake outer membrane protein | DBR11_03655 | Not Available | Negative | 893375 - 895174 | 66077.8 |
| susc/raga family tonb-linked outer membrane protein | DBR11_03660 | Not Available | Negative | 895194 - 898382 | 117177.0 |
| fad-dependent oxidoreductase | DBR11_03665 | Not Available | Negative | 898420 - 900267 | 68428.4 |
| hypothetical protein | DBR11_03670 | Not Available | Negative | 900307 - 901320 | 35718.6 |
| hypothetical protein | DBR11_03675 | Not Available | Negative | 901355 - 901553 | 7140.83 |
| glycerol-3-phosphate dehydrogenase | DBR11_03680 | Not Available | Negative | 901644 - 902642 | 37170.0 |
| efflux rnd transporter periplasmic adaptor subunit | DBR11_03685 | Not Available | Negative | 902718 - 904076 | 48620.3 |
| tolc family protein | DBR11_03690 | Not Available | Negative | 904112 - 905497 | 51139.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

