Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. HMWF019 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2047598 bp
Thymine Count
2061021 bp
Guanine Count
1407723 bp
Cytosine Count
1388793 bp
Genome Length
6906470 bp
Protein-coding Genes
5696 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| susc/raga family tonb-linked outer membrane protein | DBR11_29265 | Not Available | Positive | 6888689 - 6891859 | 115648.0 |
| ragb/susd family nutrient uptake outer membrane protein | DBR11_29270 | Not Available | Positive | 6891859 - 6893391 | 56436.4 |
| hypothetical protein | DBR11_29275 | Not Available | Positive | 6893455 - 6894354 | 33228.4 |
| alpha-l-fucosidase | DBR11_29280 | Not Available | Positive | 6896026 - 6897351 | 50383.1 |
| tonb-dependent receptor | DBR11_29285 | Not Available | Positive | 6897457 - 6899898 | 90247.4 |
| hypothetical protein | DBR11_29295 | Not Available | Positive | 6901364 - 6902110 | 28829.5 |
| hypothetical protein | DBR11_29300 | Not Available | Positive | 6902360 - 6903058 | 26843.6 |
| hypothetical protein | DBR11_29305 | Not Available | Negative | 6903133 - 6903348 | 7954.76 |
| transcriptional regulator | DBR11_29310 | Not Available | Positive | 6903545 - 6903901 | 13381.5 |
| hypothetical protein | DBR11_29320 | Not Available | Positive | 6904578 - 6904859 | 10671.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

