Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. HMWF019 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2047598 bp
Thymine Count
2061021 bp
Guanine Count
1407723 bp
Cytosine Count
1388793 bp
Genome Length
6906470 bp
Protein-coding Genes
5696 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar transporter | DBR11_29210 | Not Available | Negative | 6875584 - 6876319 | 27061.6 |
| histidinol phosphatase | DBR11_29215 | Not Available | Positive | 6876601 - 6877323 | 27459.2 |
| hypothetical protein | DBR11_29220 | Not Available | Negative | 6877387 - 6878088 | 25805.8 |
| ragb/susd family nutrient uptake outer membrane protein | DBR11_29225 | Not Available | Negative | 6878105 - 6880006 | 70400.6 |
| susc/raga family tonb-linked outer membrane protein | DBR11_29230 | Not Available | Negative | 6880039 - 6883242 | 120248.0 |
| arac family transcriptional regulator | DBR11_29240 | Not Available | Negative | 6885033 - 6885479 | 16816.6 |
| pepsy domain-containing protein | DBR11_29245 | Not Available | Positive | 6885673 - 6886905 | 45887.1 |
| hypothetical protein | DBR11_29250 | Not Available | Positive | 6887058 - 6887240 | 7084.01 |
| duf72 domain-containing protein | DBR11_29255 | Not Available | Positive | 6887252 - 6887998 | 28831.4 |
| histidine kinase | DBR11_29260 | Not Available | Positive | 6888105 - 6888627 | 20044.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

