Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. HMWF019 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2047598 bp
Thymine Count
2061021 bp
Guanine Count
1407723 bp
Cytosine Count
1388793 bp
Genome Length
6906470 bp
Protein-coding Genes
5696 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ragb/susd family nutrient uptake outer membrane protein | DBR11_28515 | Not Available | Positive | 6727222 - 6729009 | 67468.0 |
| metallophosphoesterase | DBR11_28520 | Not Available | Positive | 6729031 - 6729945 | 34415.9 |
| helix-turn-helix transcriptional regulator | DBR11_28525 | Not Available | Positive | 6730965 - 6731702 | 28165.8 |
| atp-binding protein | DBR11_28530 | Not Available | Negative | 6731699 - 6732678 | 36930.5 |
| glycosyl transferase family 1 | DBR11_28535 | Not Available | Positive | 6732679 - 6733432 | 28440.0 |
| acetyltransferase | DBR11_28540 | Not Available | Positive | 6733436 - 6734056 | 22656.7 |
| hypothetical protein | DBR11_28545 | Not Available | Positive | 6734053 - 6734628 | 21596.3 |
| gmc family oxidoreductase | DBR11_28550 | Not Available | Positive | 6734635 - 6736335 | 63651.1 |
| glycosyl transferase family 2 | DBR11_28555 | Not Available | Negative | 6736346 - 6737089 | 27772.2 |
| mbl fold metallo-hydrolase | DBR11_28560 | Not Available | Positive | 6737235 - 6738104 | 32309.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

