Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. HMWF019 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2047598 bp
Thymine Count
2061021 bp
Guanine Count
1407723 bp
Cytosine Count
1388793 bp
Genome Length
6906470 bp
Protein-coding Genes
5696 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arginase | DBR11_02690 | Not Available | Negative | 669797 - 670771 | 35938.0 |
| exodeoxyribonuclease iii | DBR11_02695 | Not Available | Negative | 670832 - 671602 | 29708.4 |
| peptidylprolyl isomerase | DBR11_02700 | Not Available | Negative | 671599 - 672327 | 27601.4 |
| 4,5-dopa dioxygenase extradiol | DBR11_02705 | Not Available | Positive | 672437 - 673264 | 30765.1 |
| aldehyde dehydrogenase family protein | DBR11_02710 | Not Available | Negative | 673269 - 674672 | 52174.3 |
| alkyl hydroperoxide reductase | DBR11_02715 | Not Available | Positive | 674910 - 675455 | 20715.3 |
| alkylhydroperoxidase | DBR11_02720 | Not Available | Positive | 675533 - 676117 | 21520.9 |
| phosphoenolpyruvate carboxylase | DBR11_02725 | Not Available | Negative | 676179 - 678770 | 98518.7 |
| mfs transporter | DBR11_02730 | Not Available | Negative | 679077 - 680624 | 56101.5 |
| hlyd family secretion protein | DBR11_02735 | Not Available | Negative | 680628 - 681671 | 37481.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

