Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. HMWF019 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2047598 bp
Thymine Count
2061021 bp
Guanine Count
1407723 bp
Cytosine Count
1388793 bp
Genome Length
6906470 bp
Protein-coding Genes
5696 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tyrosine--trna ligase | DBR11_27875 | Not Available | Positive | 6581275 - 6582561 | 47943.4 |
| acyl transferase | DBR11_27880 | Not Available | Negative | 6582647 - 6583627 | 36995.4 |
| hypothetical protein | DBR11_27885 | Not Available | Negative | 6583667 - 6584032 | 13317.2 |
| penicillin acylase family protein | DBR11_27890 | Not Available | Negative | 6584036 - 6586471 | 92303.0 |
| tonb-dependent receptor | DBR11_27895 | Not Available | Positive | 6586669 - 6589557 | 105239.0 |
| glycosyl hydrolase | DBR11_27900 | Not Available | Positive | 6589822 - 6592293 | 96202.6 |
| 1,4-alpha-glucan branching protein glgb | DBR11_27905 | Not Available | Positive | 6592325 - 6594271 | 74688.3 |
| hypothetical protein | DBR11_27910 | Not Available | Negative | 6594819 - 6595148 | 12481.0 |
| hypothetical protein | DBR11_27915 | Not Available | Positive | 6595458 - 6595928 | 17729.7 |
| transcription elongation factor grea | DBR11_27920 | Not Available | Positive | 6596380 - 6596778 | 14954.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

