Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. HMWF019 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2047598 bp
Thymine Count
2061021 bp
Guanine Count
1407723 bp
Cytosine Count
1388793 bp
Genome Length
6906470 bp
Protein-coding Genes
5696 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DBR11_27150 | Not Available | Negative | 6429209 - 6430756 | 57367.4 |
| tonb-dependent receptor | DBR11_27155 | Not Available | Negative | 6430766 - 6433864 | 113565.0 |
| hypothetical protein | DBR11_27160 | Not Available | Positive | 6434112 - 6434885 | 29247.3 |
| tonb-dependent siderophore receptor | DBR11_27165 | Not Available | Negative | 6434926 - 6437328 | 88598.2 |
| dna-protecting protein dpra | DBR11_27170 | Not Available | Negative | 6437652 - 6438737 | 39703.6 |
| chromosome partitioning protein para | DBR11_27175 | Not Available | Positive | 6439141 - 6441024 | 74222.4 |
| thua domain-containing protein | DBR11_27185 | Not Available | Negative | 6443467 - 6444306 | 32485.4 |
| susc/raga family tonb-linked outer membrane protein | DBR11_27190 | Not Available | Positive | 6444659 - 6447246 | 94746.7 |
| hypothetical protein | DBR11_27195 | Not Available | Negative | 6447247 - 6449894 | 90013.8 |
| phage tail protein | DBR11_27200 | Not Available | Negative | 6449913 - 6450467 | 19288.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

