Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. HMWF019 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2047598 bp
Thymine Count
2061021 bp
Guanine Count
1407723 bp
Cytosine Count
1388793 bp
Genome Length
6906470 bp
Protein-coding Genes
5696 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-amylase | DBR11_02590 | Not Available | Negative | 644647 - 646434 | 66310.0 |
| family 65 glycosyl hydrolase | DBR11_02595 | Not Available | Negative | 646425 - 648743 | 88558.5 |
| beta-phosphoglucomutase | DBR11_02600 | Not Available | Negative | 648778 - 649452 | 24590.6 |
| alpha-amylase | DBR11_02605 | Not Available | Negative | 649463 - 651269 | 68772.5 |
| excinuclease abc subunit a | DBR11_02610 | Not Available | Positive | 651481 - 654282 | 104230.0 |
| lysine transporter lyse | DBR11_02615 | Not Available | Positive | 654297 - 654920 | 23416.3 |
| duf2157 domain-containing protein | DBR11_02620 | Not Available | Negative | 654924 - 655961 | 40367.4 |
| sodium:proton antiporter | DBR11_02625 | Not Available | Negative | 655987 - 658215 | 81909.8 |
| hypothetical protein | DBR11_02630 | Not Available | Negative | 658271 - 658600 | 12622.2 |
| riboflavin biosynthesis protein ribf | DBR11_02635 | Not Available | Negative | 658650 - 659594 | 35663.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

