Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. HMWF019 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2047598 bp
Thymine Count
2061021 bp
Guanine Count
1407723 bp
Cytosine Count
1388793 bp
Genome Length
6906470 bp
Protein-coding Genes
5696 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DBR11_26840 | Not Available | Positive | 6354092 - 6354589 | 18447.9 |
| rna pseudouridine synthase | DBR11_26845 | Not Available | Negative | 6354586 - 6355272 | 26068.6 |
| 3-methyl-2-oxobutanoate hydroxymethyltransferase | DBR11_26850 | Not Available | Negative | 6355276 - 6356091 | 29394.6 |
| susc/raga family tonb-linked outer membrane protein | DBR11_26855 | Not Available | Positive | 6356755 - 6357241 | 18563.6 |
| ragb/susd family nutrient uptake outer membrane protein | DBR11_26860 | Not Available | Positive | 6357255 - 6359129 | 70568.4 |
| glycosyl hydrolase | DBR11_26865 | Not Available | Positive | 6359222 - 6361438 | 81753.4 |
| glycoside hydrolase family 2 | DBR11_26870 | Not Available | Positive | 6361447 - 6364116 | 100969.0 |
| alginate lyase | DBR11_26875 | Not Available | Positive | 6364141 - 6365319 | 44950.1 |
| glucuronyl hydrolase | DBR11_26880 | Not Available | Positive | 6365338 - 6366510 | 44670.8 |
| hypothetical protein | DBR11_26885 | Not Available | Negative | 6366537 - 6368957 | 90592.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

