Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. HMWF019 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2047598 bp
Thymine Count
2061021 bp
Guanine Count
1407723 bp
Cytosine Count
1388793 bp
Genome Length
6906470 bp
Protein-coding Genes
5696 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| asp-trna(asn)/glu-trna(gln) amidotransferase gatcab subunit c | DBR11_26530 | Not Available | Positive | 6291800 - 6292090 | 11297.8 |
| macrolide abc transporter atp-binding protein | DBR11_26535 | Not Available | Positive | 6292141 - 6292899 | 27620.3 |
| cob(i)yrinic acid a,c-diamide adenosyltransferase | DBR11_26540 | Not Available | Positive | 6292997 - 6293545 | 20812.3 |
| hypothetical protein | DBR11_26545 | Not Available | Positive | 6293626 - 6293777 | 4931.88 |
| 6-phosphofructokinase | DBR11_26550 | Not Available | Negative | 6293810 - 6294793 | 35097.5 |
| hypothetical protein | DBR11_26555 | Not Available | Negative | 6294801 - 6296507 | 62152.9 |
| sugar transporter | DBR11_26560 | Not Available | Negative | 6296813 - 6297262 | 16760.4 |
| biotin--[acetyl-coa-carboxylase] ligase | DBR11_26565 | Not Available | Negative | 6297294 - 6297456 | 6476.66 |
| duf47 domain-containing protein | DBR11_26570 | Not Available | Positive | 6297583 - 6298230 | 24364.3 |
| anion permease | DBR11_26575 | Not Available | Positive | 6298242 - 6299252 | 35891.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

