Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. HMWF019 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2047598 bp
Thymine Count
2061021 bp
Guanine Count
1407723 bp
Cytosine Count
1388793 bp
Genome Length
6906470 bp
Protein-coding Genes
5696 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fad-binding protein | DBR11_26425 | Not Available | Negative | 6272498 - 6274039 | 56332.9 |
| chaperonin groel | DBR11_26430 | Not Available | Negative | 6274290 - 6275874 | 55589.9 |
| hypothetical protein | DBR11_26435 | Not Available | Positive | 6275885 - 6276112 | 7945.33 |
| adenylosuccinate lyase | DBR11_26440 | Not Available | Positive | 6276233 - 6277579 | 50554.1 |
| nifu family protein | DBR11_26445 | Not Available | Positive | 6277682 - 6278230 | 20287.0 |
| inositol monophosphatase | DBR11_26450 | Not Available | Negative | 6278304 - 6279098 | 29611.2 |
| diacylglyceryl transferase | DBR11_26455 | Not Available | Negative | 6279110 - 6280264 | 42979.2 |
| trna (n(6)-l-threonylcarbamoyladenosine(37)-c(2))- methylthiotransferase mtab | DBR11_26460 | Not Available | Negative | 6280296 - 6281615 | 49160.0 |
| 3-octaprenyl-4-hydroxybenzoate carboxy-lyase | DBR11_26465 | Not Available | Negative | 6281730 - 6282293 | 20857.2 |
| dna mismatch repair protein mutt | DBR11_26470 | Not Available | Positive | 6282510 - 6283162 | 24738.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

