Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. HMWF019 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2047598 bp
Thymine Count
2061021 bp
Guanine Count
1407723 bp
Cytosine Count
1388793 bp
Genome Length
6906470 bp
Protein-coding Genes
5696 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2219 domain-containing protein | DBR11_26075 | Not Available | Negative | 6204589 - 6205542 | 35680.2 |
| endopeptidase la | DBR11_26080 | Not Available | Negative | 6205603 - 6208077 | 92134.8 |
| hypothetical protein | DBR11_26085 | Not Available | Positive | 6208349 - 6208975 | 23561.4 |
| hypothetical protein | DBR11_26090 | Not Available | Negative | 6209050 - 6209574 | 19922.9 |
| 2,3-bisphosphoglycerate-independent phosphoglycerate mutase | DBR11_26095 | Not Available | Negative | 6209574 - 6211094 | 55821.3 |
| duf4783 domain-containing protein | DBR11_26100 | Not Available | Positive | 6211236 - 6211631 | 14721.0 |
| dna-binding response regulator | DBR11_26105 | Not Available | Negative | 6211730 - 6212497 | 30119.7 |
| histidine kinase | DBR11_26110 | Not Available | Negative | 6212494 - 6213453 | 36178.9 |
| rna polymerase rpb6 | DBR11_26115 | Not Available | Negative | 6213541 - 6213611 | 2659.07 |
| outer membrane protein assembly factor bamd | DBR11_26120 | Not Available | Negative | 6213611 - 6214537 | 36100.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

