Pedobacter sp. HMWF019

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Sphingobacteriia

Order

Sphingobacteriales

Family

Sphingobacteriaceae

Genus

Pedobacter

Description

Pedobacter sp. HMWF019 is a bacterial strain characterized by the presence of flagella, which suggests it has the capability for motility. This trait can enhance its ability to navigate through various environments, potentially influencing its ecological interactions. The strain contains a single replicon, indicating a streamlined genomic structure that may contribute to its adaptability and efficiency in nutrient utilization. The accession number for this strain is QAIL00000000.1, which serves as a reference for genomic studies and facilitates further investigation into its genetic makeup and functional capabilities. The genomic information can provide insights into metabolic pathways, ecological roles, and potential applications in biotechnology. In summary, the motility conferred by flagella and the presence of a single replicon in Pedobacter sp. HMWF019 may play a significant role in its ecological niche, allowing it to interact effectively with its environment. These traits underscore the potential importance of this strain in microbial communities, where mobility and efficient resource use are critical for survival and competition.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassSphingobacteriia
OrderSphingobacteriales
FamilySphingobacteriaceae
GenusPedobacter
SpeciesPedobacter sp. HMWF019
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pedobacter sp. HMWF019 NODE_895_length_1478_cov_7.076455, whole

Gene Summary

Adenine Count

2047598 bp

Thymine Count

2061021 bp

Guanine Count

1407723 bp

Cytosine Count

1388793 bp

Genome Length

6906470 bp

Protein-coding Genes

5696 genes

Non-Coding Genes

56 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinDBR11_25920Not AvailableNegative6176518 - 617820365189.9
cold-shock proteinDBR11_25925Not AvailablePositive6178644 - 61788356940.14
hypothetical proteinDBR11_25930Not AvailableNegative6178930 - 617922911691.2
hsp20/alpha crystallin family proteinDBR11_25935Not AvailableNegative6179291 - 617973116868.8
phosphatase pap2 family proteinDBR11_25940Not AvailablePositive6179999 - 618061022115.0
hypothetical proteinDBR11_25945Not AvailableNegative6180632 - 618121322189.9
hypothetical proteinDBR11_25950Not AvailableNegative6181265 - 61813984612.61
ai-2e family transporterDBR11_25955Not AvailableNegative6181456 - 618250839536.7
sigma-54-dependent fis family transcriptional regulatorDBR11_25960Not AvailableNegative6182515 - 618391551960.6
asnc family transcriptional regulatorDBR11_25965Not AvailablePositive6183951 - 618441217669.4

Displaying genes 5101 – 5110 of 5752 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.