Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. HMWF019 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2047598 bp
Thymine Count
2061021 bp
Guanine Count
1407723 bp
Cytosine Count
1388793 bp
Genome Length
6906470 bp
Protein-coding Genes
5696 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | DBR11_02490 | Not Available | Negative | 619192 - 621585 | 88823.0 |
| hemin abc transporter substrate-binding protein | DBR11_02495 | Not Available | Positive | 621930 - 622757 | 29537.2 |
| fe3+-siderophore abc transporter permease | DBR11_02500 | Not Available | Positive | 622751 - 623797 | 36661.9 |
| heme abc transporter atp-binding protein | DBR11_02505 | Not Available | Positive | 623799 - 624593 | 29579.1 |
| alanyl-trna synthetase | DBR11_02510 | Not Available | Positive | 624590 - 624730 | 5581.09 |
| hypothetical protein | DBR11_02515 | Not Available | Negative | 624787 - 627765 | 111964.0 |
| x-pro dipeptidyl-peptidase | DBR11_02520 | Not Available | Negative | 627860 - 629719 | 70996.8 |
| dna alkylation repair protein | DBR11_02525 | Not Available | Positive | 629873 - 630970 | 42349.2 |
| nadph-dependent ferric siderophore reductase | DBR11_02530 | Not Available | Negative | 630957 - 631805 | 31827.7 |
| gntr family transcriptional regulator | DBR11_02535 | Not Available | Positive | 632072 - 632803 | 28085.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

