Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. HMWF019 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2047598 bp
Thymine Count
2061021 bp
Guanine Count
1407723 bp
Cytosine Count
1388793 bp
Genome Length
6906470 bp
Protein-coding Genes
5696 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sterol desaturase family protein | DBR11_25765 | Not Available | Negative | 6144715 - 6145611 | 35106.7 |
| 3-dehydroquinate synthase | DBR11_25770 | Not Available | Negative | 6145601 - 6146668 | 39990.8 |
| rna-binding protein | DBR11_25775 | Not Available | Negative | 6146668 - 6146874 | 7567.41 |
| proline dehydrogenase | DBR11_25780 | Not Available | Positive | 6146969 - 6148153 | 44896.0 |
| ragb/susd family nutrient uptake outer membrane protein | DBR11_25785 | Not Available | Negative | 6148332 - 6149699 | 50647.7 |
| susc/raga family tonb-linked outer membrane protein | DBR11_25790 | Not Available | Negative | 6149720 - 6152845 | 113865.0 |
| aromatic amino acid transporter arop | DBR11_25795 | Not Available | Negative | 6153060 - 6154496 | 52838.0 |
| hypothetical protein | DBR11_25800 | Not Available | Negative | 6154669 - 6154929 | 9875.91 |
| hypothetical protein | DBR11_25805 | Not Available | Negative | 6154901 - 6155131 | 8709.64 |
| hypothetical protein | DBR11_25810 | Not Available | Negative | 6155121 - 6155795 | 25903.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

