Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. HMWF019 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2047598 bp
Thymine Count
2061021 bp
Guanine Count
1407723 bp
Cytosine Count
1388793 bp
Genome Length
6906470 bp
Protein-coding Genes
5696 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l35 | DBR11_25715 | Not Available | Negative | 6134950 - 6135150 | 7361.22 |
| translation initiation factor if-3 | DBR11_25720 | Not Available | Negative | 6135177 - 6135633 | 17192.1 |
| histone h1 | DBR11_25725 | Not Available | Positive | 6135703 - 6135879 | 6508.81 |
| hypothetical protein | DBR11_25730 | Not Available | Negative | 6135950 - 6137188 | 45431.0 |
| duf1573 domain-containing protein | DBR11_25735 | Not Available | Negative | 6137309 - 6137520 | 7804.56 |
| transketolase | DBR11_25740 | Not Available | Positive | 6137650 - 6140073 | 89588.0 |
| chorismate synthase | DBR11_25745 | Not Available | Negative | 6140134 - 6141222 | 38978.5 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | DBR11_25750 | Not Available | Negative | 6141239 - 6142492 | 45827.3 |
| 3-deoxy-7-phosphoheptulonate synthase | DBR11_25755 | Not Available | Negative | 6142495 - 6143634 | 41942.7 |
| prephenate dehydratase | DBR11_25760 | Not Available | Negative | 6143678 - 6144511 | 31606.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

