Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. HMWF019 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2047598 bp
Thymine Count
2061021 bp
Guanine Count
1407723 bp
Cytosine Count
1388793 bp
Genome Length
6906470 bp
Protein-coding Genes
5696 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| intradiol ring-cleavage dioxygenase | DBR11_25145 | Not Available | Positive | 6020036 - 6020764 | 25537.8 |
| hypothetical protein | DBR11_25150 | Not Available | Positive | 6020764 - 6021258 | 19404.4 |
| hypothetical protein | DBR11_25155 | Not Available | Positive | 6021260 - 6021970 | 26182.2 |
| stas/sec14 domain-containing protein | DBR11_25160 | Not Available | Positive | 6022066 - 6022434 | 13612.5 |
| 4-hydroxy-tetrahydrodipicolinate reductase | DBR11_25165 | Not Available | Negative | 6022745 - 6023554 | 28793.6 |
| rna polymerase subunit sigma-70 | DBR11_25170 | Not Available | Positive | 6023800 - 6024143 | 13473.1 |
| transporter | DBR11_25175 | Not Available | Negative | 6024144 - 6025476 | 49406.6 |
| sec-independent protein translocase tatc | DBR11_25180 | Not Available | Positive | 6025652 - 6026023 | 14366.7 |
| duf1634 domain-containing protein | DBR11_25185 | Not Available | Positive | 6026484 - 6026562 | 2820.66 |
| 50s ribosomal protein l3 | DBR11_25190 | Not Available | Positive | 6026742 - 6027359 | 21863.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

