Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. HMWF019 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2047598 bp
Thymine Count
2061021 bp
Guanine Count
1407723 bp
Cytosine Count
1388793 bp
Genome Length
6906470 bp
Protein-coding Genes
5696 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-oxoglutarate dehydrogenase e1 component | DBR11_24875 | Not Available | Positive | 5954486 - 5957281 | 105473.0 |
| dihydrolipoyllysine-residue succinyltransferase | DBR11_24880 | Not Available | Positive | 5957302 - 5958531 | 43602.8 |
| asnc family transcriptional regulator | DBR11_24885 | Not Available | Positive | 5958629 - 5958948 | 12174.7 |
| hypothetical protein | DBR11_24890 | Not Available | Negative | 5958961 - 5960889 | 73697.2 |
| beta-hexosaminidase | DBR11_24895 | Not Available | Negative | 5960891 - 5962345 | 56331.5 |
| duf72 domain-containing protein | DBR11_24900 | Not Available | Negative | 5962418 - 5963341 | 35356.5 |
| serine protease | DBR11_24905 | Not Available | Negative | 5963417 - 5964508 | 39808.7 |
| rna polymerase subunit sigma-70 | DBR11_24910 | Not Available | Negative | 5964516 - 5965082 | 21975.2 |
| hypothetical protein | DBR11_24915 | Not Available | Positive | 5965352 - 5966128 | 29601.2 |
| hypothetical protein | DBR11_24920 | Not Available | Positive | 5966198 - 5966548 | 13955.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

