Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. HMWF019 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2047598 bp
Thymine Count
2061021 bp
Guanine Count
1407723 bp
Cytosine Count
1388793 bp
Genome Length
6906470 bp
Protein-coding Genes
5696 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| marr family transcriptional regulator | DBR11_24825 | Not Available | Positive | 5942341 - 5942444 | 3794.51 |
| 3-hydroxyacyl-coa dehydrogenase | DBR11_24830 | Not Available | Positive | 5942422 - 5944785 | 86953.9 |
| acetyl-coa c-acyltransferase | DBR11_24835 | Not Available | Positive | 5944811 - 5945989 | 41814.5 |
| acyl-coa dehydrogenase | DBR11_24840 | Not Available | Positive | 5946037 - 5947827 | 65766.4 |
| peptidylprolyl isomerase | DBR11_24845 | Not Available | Positive | 5947948 - 5948448 | 18159.4 |
| hypothetical protein | DBR11_24850 | Not Available | Positive | 5948451 - 5949389 | 33273.5 |
| deoxyribodipyrimidine photolyase | DBR11_24855 | Not Available | Negative | 5949390 - 5950697 | 51278.1 |
| tigr01777 family protein | DBR11_24860 | Not Available | Negative | 5950747 - 5951655 | 33585.1 |
| dash family cryptochrome | DBR11_24865 | Not Available | Positive | 5952139 - 5953437 | 49707.7 |
| merr family transcriptional regulator | DBR11_24870 | Not Available | Positive | 5953515 - 5954420 | 34703.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

