Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. HMWF019 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2047598 bp
Thymine Count
2061021 bp
Guanine Count
1407723 bp
Cytosine Count
1388793 bp
Genome Length
6906470 bp
Protein-coding Genes
5696 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidine kinase | DBR11_24775 | Not Available | Negative | 5931291 - 5932406 | 43111.1 |
| multidrug abc transporter substrate-binding protein | DBR11_24780 | Not Available | Negative | 5932399 - 5933622 | 43613.6 |
| abc transporter atp-binding protein | DBR11_24785 | Not Available | Negative | 5933632 - 5934378 | 27528.1 |
| efflux rnd transporter periplasmic adaptor subunit | DBR11_24790 | Not Available | Negative | 5934378 - 5935577 | 43362.1 |
| transporter | DBR11_24795 | Not Available | Negative | 5935589 - 5936911 | 48333.8 |
| histidine kinase | DBR11_24800 | Not Available | Negative | 5937122 - 5938381 | 47993.1 |
| sigma-54-dependent fis family transcriptional regulator | DBR11_24805 | Not Available | Negative | 5938365 - 5939738 | 51831.2 |
| abc transporter permease | DBR11_24810 | Not Available | Negative | 5939794 - 5940837 | 38872.4 |
| doxx family protein | DBR11_24815 | Not Available | Positive | 5940959 - 5941402 | 16393.5 |
| hypothetical protein | DBR11_24820 | Not Available | Negative | 5941419 - 5942243 | 32530.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

