Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. HMWF019 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2047598 bp
Thymine Count
2061021 bp
Guanine Count
1407723 bp
Cytosine Count
1388793 bp
Genome Length
6906470 bp
Protein-coding Genes
5696 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DBR11_24565 | Not Available | Positive | 5887631 - 5888038 | 15110.2 |
| hypothetical protein | DBR11_24570 | Not Available | Negative | 5888004 - 5888981 | 37143.0 |
| glycosyl transferase | DBR11_24575 | Not Available | Positive | 5889072 - 5890286 | 45906.5 |
| alpha-ketoglutarate-dependent dioxygenase alkb | DBR11_24580 | Not Available | Negative | 5890270 - 5890878 | 23386.0 |
| rna polymerase sigma factor | DBR11_24585 | Not Available | Positive | 5891186 - 5891725 | 21315.6 |
| hypothetical protein | DBR11_24590 | Not Available | Positive | 5891735 - 5892973 | 45338.0 |
| tetr/acrr family transcriptional regulator | DBR11_24595 | Not Available | Positive | 5893129 - 5893711 | 21929.0 |
| hypothetical protein | DBR11_24600 | Not Available | Negative | 5893712 - 5894584 | 33161.1 |
| hypothetical protein | DBR11_24605 | Not Available | Positive | 5894760 - 5895146 | 14781.4 |
| hypothetical protein | DBR11_24610 | Not Available | Positive | 5895668 - 5896846 | 45456.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

