Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. HMWF019 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2047598 bp
Thymine Count
2061021 bp
Guanine Count
1407723 bp
Cytosine Count
1388793 bp
Genome Length
6906470 bp
Protein-coding Genes
5696 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| magnesium transporter mgtc | DBR11_24405 | Not Available | Positive | 5856605 - 5857240 | 23077.7 |
| choloylglycine hydrolase | DBR11_24410 | Not Available | Negative | 5857253 - 5858293 | 38386.7 |
| cdp-alcohol phosphatidyltransferase | DBR11_24415 | Not Available | Positive | 5858429 - 5859043 | 23535.7 |
| scramblase | DBR11_24420 | Not Available | Negative | 5859050 - 5859637 | 22575.2 |
| iron-dependent repressor | DBR11_24425 | Not Available | Positive | 5859793 - 5860455 | 24876.9 |
| duf2130 domain-containing protein | DBR11_24430 | Not Available | Positive | 5860526 - 5861755 | 48289.8 |
| 23s rrna (adenine(1618)-n(6))-methyltransferase rlmf | DBR11_24435 | Not Available | Negative | 5861782 - 5862684 | 33605.1 |
| diacylglycerol kinase | DBR11_24440 | Not Available | Positive | 5862768 - 5863115 | 12682.9 |
| dna repair protein reco | DBR11_24445 | Not Available | Positive | 5863116 - 5863698 | 22518.5 |
| hypothetical protein | DBR11_24450 | Not Available | Negative | 5863699 - 5864298 | 22854.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

