Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. HMWF019 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2047598 bp
Thymine Count
2061021 bp
Guanine Count
1407723 bp
Cytosine Count
1388793 bp
Genome Length
6906470 bp
Protein-coding Genes
5696 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DBR11_24300 | Not Available | Negative | 5837656 - 5838045 | 14847.8 |
| histidine kinase | DBR11_24305 | Not Available | Negative | 5838142 - 5839641 | 56833.7 |
| peptidase s13 | DBR11_24310 | Not Available | Positive | 5839676 - 5840995 | 49612.1 |
| aminotransferase class i/ii | DBR11_24315 | Not Available | Positive | 5840982 - 5842043 | 38839.6 |
| mfs transporter | DBR11_24320 | Not Available | Positive | 5842091 - 5843263 | 42010.6 |
| d-alanyl-d-alanine dipeptidase | DBR11_24325 | Not Available | Negative | 5843260 - 5843937 | 25739.4 |
| alanine dehydrogenase | DBR11_24330 | Not Available | Negative | 5843941 - 5845167 | 44052.6 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex atpase subunit type 1 tsae | DBR11_24335 | Not Available | Negative | 5845229 - 5845648 | 16167.2 |
| two-component system response regulator | DBR11_24340 | Not Available | Negative | 5845660 - 5847213 | 60459.5 |
| hypothetical protein | DBR11_24345 | Not Available | Positive | 5847405 - 5848160 | 29209.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

