Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. HMWF019 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2047598 bp
Thymine Count
2061021 bp
Guanine Count
1407723 bp
Cytosine Count
1388793 bp
Genome Length
6906470 bp
Protein-coding Genes
5696 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iron dicitrate transport regulator fecr | DBR11_23880 | Not Available | Positive | 5744589 - 5745806 | 44911.3 |
| susc/raga family tonb-linked outer membrane protein | DBR11_23885 | Not Available | Positive | 5746051 - 5749440 | 124163.0 |
| ragb/susd family nutrient uptake outer membrane protein | DBR11_23890 | Not Available | Positive | 5749460 - 5751274 | 67354.9 |
| alpha-1,6-mannanase | DBR11_23895 | Not Available | Positive | 5751343 - 5752476 | 42715.4 |
| hypothetical protein | DBR11_23900 | Not Available | Positive | 5752484 - 5754658 | 82739.0 |
| alpha-mannosidase | DBR11_23905 | Not Available | Positive | 5754683 - 5756959 | 86411.4 |
| transcriptional regulator | DBR11_23910 | Not Available | Negative | 5756956 - 5757312 | 13624.9 |
| cupin domain-containing protein | DBR11_23915 | Not Available | Positive | 5757398 - 5757880 | 17746.3 |
| hypothetical protein | DBR11_23920 | Not Available | Negative | 5757890 - 5758093 | 7505.92 |
| duf779 domain-containing protein | DBR11_23925 | Not Available | Negative | 5758160 - 5758549 | 14442.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

