Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. HMWF019 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2047598 bp
Thymine Count
2061021 bp
Guanine Count
1407723 bp
Cytosine Count
1388793 bp
Genome Length
6906470 bp
Protein-coding Genes
5696 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| deda family protein | DBR11_23680 | Not Available | Negative | 5710491 - 5711150 | 24630.0 |
| dna polymerase iii subunit beta | DBR11_23685 | Not Available | Negative | 5711262 - 5712340 | 39444.0 |
| sugar kinase | DBR11_23690 | Not Available | Positive | 5712528 - 5713442 | 33752.7 |
| cytochrome b5 | DBR11_23695 | Not Available | Negative | 5713495 - 5713731 | 9066.75 |
| rna polymerase subunit sigma | DBR11_23700 | Not Available | Negative | 5713877 - 5714062 | 7222.9 |
| fumarate hydratase | DBR11_23705 | Not Available | Positive | 5714063 - 5714340 | 10419.3 |
| s1/p1 nuclease | DBR11_23710 | Not Available | Positive | 5714344 - 5715156 | 30799.0 |
| duf1543 domain-containing protein | DBR11_23715 | Not Available | Positive | 5715167 - 5715730 | 21293.6 |
| cyanophycin synthetase | DBR11_23720 | Not Available | Negative | 5715785 - 5718400 | 96542.3 |
| cyanophycinase | DBR11_23725 | Not Available | Positive | 5718827 - 5719702 | 31055.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

