Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. HMWF019 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2047598 bp
Thymine Count
2061021 bp
Guanine Count
1407723 bp
Cytosine Count
1388793 bp
Genome Length
6906470 bp
Protein-coding Genes
5696 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-deoxy-d-manno-octulosonate 8-phosphate phosphatase | DBR11_23580 | Not Available | Negative | 5693195 - 5693722 | 19462.4 |
| fe-s assembly protein iscx | DBR11_23585 | Not Available | Negative | 5693726 - 5693968 | 9771.2 |
| ferredoxin | DBR11_23590 | Not Available | Negative | 5693989 - 5694321 | 12151.4 |
| duf2520 domain-containing protein | DBR11_23595 | Not Available | Negative | 5694361 - 5695128 | 27880.8 |
| cytochrome c biogenesis protein | DBR11_23600 | Not Available | Negative | 5695125 - 5697599 | 93107.9 |
| cytochrome c biogenesis protein | DBR11_23605 | Not Available | Negative | 5697608 - 5698018 | 15550.6 |
| peptide-methionine (s)-s-oxide reductase | DBR11_23610 | Not Available | Negative | 5698159 - 5698821 | 25201.1 |
| glutamate dehydrogenase | DBR11_23615 | Not Available | Negative | 5698930 - 5700351 | 51674.1 |
| ccmd family protein | DBR11_23620 | Not Available | Negative | 5700501 - 5700719 | 8109.34 |
| abc transporter permease | DBR11_23625 | Not Available | Negative | 5700721 - 5701380 | 25263.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

