Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. HMWF019 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2047598 bp
Thymine Count
2061021 bp
Guanine Count
1407723 bp
Cytosine Count
1388793 bp
Genome Length
6906470 bp
Protein-coding Genes
5696 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DBR11_23425 | Not Available | Negative | 5660914 - 5661465 | 18862.2 |
| hypothetical protein | DBR11_23430 | Not Available | Negative | 5661578 - 5662432 | 30741.8 |
| hypothetical protein | DBR11_23435 | Not Available | Negative | 5662465 - 5662752 | 10608.6 |
| hypothetical protein | DBR11_23440 | Not Available | Negative | 5662886 - 5663232 | 13591.9 |
| rna polymerase sigma factor rpod/siga | DBR11_23445 | Not Available | Positive | 5663324 - 5664184 | 32680.1 |
| glyceraldehyde-3-phosphate dehydrogenase | DBR11_23450 | Not Available | Positive | 5664283 - 5665731 | 53506.0 |
| aldo/keto reductase | DBR11_23455 | Not Available | Negative | 5665799 - 5666782 | 36588.2 |
| peptidase m20 | DBR11_23460 | Not Available | Positive | 5666955 - 5667251 | 11133.7 |
| 3-deoxy-d-manno-octulosonic acid transferase | DBR11_23465 | Not Available | Negative | 5667252 - 5667728 | 18901.2 |
| udp-glucose 6-dehydrogenase | DBR11_23470 | Not Available | Positive | 5667874 - 5669184 | 47948.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

