Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. HMWF019 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2047598 bp
Thymine Count
2061021 bp
Guanine Count
1407723 bp
Cytosine Count
1388793 bp
Genome Length
6906470 bp
Protein-coding Genes
5696 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s13 | DBR11_23375 | Not Available | Positive | 5651660 - 5652037 | 14160.3 |
| 30s ribosomal protein s11 | DBR11_23380 | Not Available | Positive | 5652059 - 5652448 | 13806.9 |
| 30s ribosomal protein s4 | DBR11_23385 | Not Available | Positive | 5652514 - 5653122 | 23024.7 |
| dna-directed rna polymerase subunit alpha | DBR11_23390 | Not Available | Positive | 5653201 - 5654193 | 37182.0 |
| 50s ribosomal protein l17 | DBR11_23395 | Not Available | Positive | 5654275 - 5654823 | 20416.3 |
| sam-dependent methyltransferase | DBR11_23400 | Not Available | Positive | 5654929 - 5656122 | 45328.3 |
| molecular chaperone dnak | DBR11_23405 | Not Available | Positive | 5656280 - 5658196 | 68598.2 |
| nucleotidyltransferase | DBR11_23410 | Not Available | Negative | 5658261 - 5659036 | 29555.9 |
| hypothetical protein | DBR11_23415 | Not Available | Positive | 5659096 - 5659977 | 31028.9 |
| hypothetical protein | DBR11_23420 | Not Available | Negative | 5660441 - 5660917 | 18396.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

