Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. HMWF019 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2047598 bp
Thymine Count
2061021 bp
Guanine Count
1407723 bp
Cytosine Count
1388793 bp
Genome Length
6906470 bp
Protein-coding Genes
5696 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| susc/raga family protein | DBR11_22915 | Not Available | Positive | 5558463 - 5561940 | 129460.0 |
| 50s ribosomal protein l28 | DBR11_22920 | Not Available | Positive | 5561999 - 5562232 | 8884.0 |
| 50s ribosomal protein l33 | DBR11_22925 | Not Available | Positive | 5562272 - 5562454 | 6956.69 |
| duf4295 domain-containing protein | DBR11_22930 | Not Available | Positive | 5562493 - 5562660 | 6005.37 |
| signal recognition particle-docking protein ftsy | DBR11_22935 | Not Available | Positive | 5562733 - 5563695 | 34840.0 |
| 30s ribosomal protein s12 methylthiotransferase rimo | DBR11_22940 | Not Available | Positive | 5563733 - 5565067 | 50419.3 |
| bacillithiol biosynthesis cysteine-adding enzyme bshc | DBR11_22945 | Not Available | Positive | 5565114 - 5566703 | 61002.4 |
| malate dehydrogenase | DBR11_22950 | Not Available | Positive | 5566713 - 5567795 | 38876.6 |
| signal peptidase i | DBR11_22955 | Not Available | Negative | 5567814 - 5569010 | 46047.2 |
| 4-hydroxy-tetrahydrodipicolinate reductase | DBR11_22960 | Not Available | Negative | 5569014 - 5569757 | 27444.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

