Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. HMWF019 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2047598 bp
Thymine Count
2061021 bp
Guanine Count
1407723 bp
Cytosine Count
1388793 bp
Genome Length
6906470 bp
Protein-coding Genes
5696 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system contractile sheath protein tssc | DBR11_22865 | Not Available | Positive | 5547990 - 5549381 | 52433.3 |
| hypothetical protein | DBR11_22870 | Not Available | Positive | 5549414 - 5550091 | 26314.7 |
| type vi secretion system needle protein hcp | DBR11_22875 | Not Available | Positive | 5550234 - 5550629 | 14608.2 |
| type vi secretion system needle protein hcp | DBR11_22880 | Not Available | Positive | 5550671 - 5551066 | 14617.2 |
| type iv secretion protein rhs | DBR11_22885 | Not Available | Positive | 5551151 - 5552983 | 66860.5 |
| hypothetical protein | DBR11_22890 | Not Available | Positive | 5552989 - 5553942 | 37238.5 |
| hypothetical protein | DBR11_22895 | Not Available | Positive | 5553944 - 5554984 | 35755.8 |
| hypothetical protein | DBR11_22900 | Not Available | Positive | 5555330 - 5555803 | 17801.6 |
| porin | DBR11_22905 | Not Available | Negative | 5555867 - 5556907 | 37457.8 |
| ammonia channel protein | DBR11_22910 | Not Available | Negative | 5556951 - 5558321 | 48614.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

