Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. HMWF019 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2047598 bp
Thymine Count
2061021 bp
Guanine Count
1407723 bp
Cytosine Count
1388793 bp
Genome Length
6906470 bp
Protein-coding Genes
5696 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-fucose mutarotase | DBR11_22555 | Not Available | Negative | 5463200 - 5463535 | 13122.0 |
| l-fucose:h+ symporter permease | DBR11_22560 | Not Available | Negative | 5463563 - 5464813 | 44946.6 |
| glycosyl hydrolase | DBR11_22565 | Not Available | Negative | 5464977 - 5466110 | 42204.8 |
| hypothetical protein | DBR11_22570 | Not Available | Positive | 5466667 - 5467821 | 42793.0 |
| marr family transcriptional regulator | DBR11_22575 | Not Available | Positive | 5468007 - 5468972 | 36330.0 |
| 3-methyl-2-oxobutanoate hydroxymethyltransferase | DBR11_22580 | Not Available | Positive | 5468981 - 5469796 | 29608.2 |
| urea transporter | DBR11_22585 | Not Available | Positive | 5469978 - 5470838 | 30636.4 |
| glucuronyl hydrolase | DBR11_22590 | Not Available | Negative | 5470982 - 5472163 | 44163.2 |
| abc transporter substrate-binding protein | DBR11_22595 | Not Available | Negative | 5472183 - 5474333 | 80955.7 |
| histidine kinase | DBR11_22600 | Not Available | Negative | 5474444 - 5474872 | 15876.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

